Free parameters in symmetry adapted models for modulated structure refinement
نویسندگان
چکیده
منابع مشابه
Use of non-crystallographic symmetry in protein structure refinement.
Several methods to assess the (dis)similarity of protein structures objectively are described, some of which, when applied to non-crystallographically related protein models, are able to discriminate between significant differences and 'random noise'. Some of these methods have been used to investigate a sample of several hundred protein structures which have been solved by means of X-ray cryst...
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Assur graphs are a tool originally developed by mechanical engineers to decompose mechanisms for simpler analysis and synthesis. Recent work has connected these graphs to strongly directed graphs, and decompositions of the pinned rigidity matrix. Many mechanisms have initial configurations which are symmetric, and other recent work has exploited the orbit matrix as a symmetry adapted form of th...
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We review the construction of continuous wavelet transforms adapted to a given symmetry. Then we discuss in detail successively spatial wavelets, wavelets on the sphere and space-time wavelets. 1. HOW TO DEFINE AN ADAPTED WAVELET TRANSFORM? As it is well-known [1], wavelet analysis comes in two versions: the continuous one, used mostly for signal or image analysis, and the discrete one, origina...
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Recent technological improvements in crystallographic data collection have led to a surge in the number of protein structures being determined at atomic or near-atomic resolution. At this resolution, structural models can be expanded to include anisotropic displacement parameters (ADPs) for individual atoms. New protocols and new tools are needed to refine, analyze and validate such models opti...
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ژورنال
عنوان ژورنال: Acta Crystallographica Section A Foundations of Crystallography
سال: 2002
ISSN: 0108-7673
DOI: 10.1107/s0108767302092322